Xu_2018_citrus

Study: The structure and function of the global citrus rhizosphere microbiome

Publications: Xu et al., The structure and function of the global citrus rhizosphere microbiome (2018, Nature Communications), Zhang et al., Huanglongbing impairs the rhizosphere-to-rhizoplane enrichment process of the citrus root-associated microbiome (2017, Microbiome)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accessions: PRJNA324090, PRJNA362455

Last annotation change: 2025-09-30

Environmental Metadata

Ca__mg_per_kg

 32%
12863.9
 2
1801
 2
2572.78
 2
2850.39
 2
other values
 10

Cu__mg_per_kg

 25%
1.63
 2
3.01
 2
3.1
 2
3.12
 2
other values
 6

Fe__mg_per_kg

 25%
10.28
 2
12.07
 2
24.46
 2
25
 2
other values
 6

K__mg_per_kg

 32%
12640
 2
13289
 2
13352
 2
164.22
 2
other values
 10

Mg__mg_per_kg

 14%
744.855
 2
561.085
 2
227
 2
1137.81
 2

Mn__mg_per_kg

 25%
10.25
 2
12.56
 2
40.3
 2
5.965
 2
other values
 6

Na__mg_per_kg

 14%
44.965
 2
27.37
 2
21.505
 2
168.13
 2

P_mg_per_kg

 32%
1140
 2
134
 2
2021
 2
239
 2
other values
 10

Percent_organic_C

 32%
0.74
 2
0.94
 2
0.95
 2
1.14
 2
other values
 10

Zn__mg_per_kg

 25%
0.63
 2
0.75
 2
0.94
 2
11.8
 2
other values
 6

climate_type

72%
Humid subtropical
 18
mediterranean
 10
Tropical
 6
Semi-arid
 6

soil_type

72%
Red earth
 10
Andisols
 6
Clay
 6
Clay loam
 6
other values
 12

total_N_mg_per_kg

 32%
900
 4
1000
 2
10800
 2
1466
 2
other values
 8

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi