Xiao_2016_pig

Study: A reference gene catalogue of the pig gut microbiome.

Publication: Xiao et al., A reference gene catalogue of the pig gut microbiome (2016, Nature Microbiology)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB11755

Last annotation change: 2025-09-29

Animal Metadata

Antibiotics_supplementation

66%
At weaning
 100
In daily feed
 95

DESCRIPTION

100%
(Landrace x Yorkshire) x Duroc
 100
Large White
 29
Binary mixed
 26
Tertiary mixed
 19
other values
 121

Farm

66%
BGI Ark
 95
SENAH (Saint Gilles)
 37
Rennes
 27
Guadeloupe
 9
other values
 27

Feed_in_group

66%
Growing
 37
306 the pregnancy sow feed
 26
307 the pregnancy sow feed
 19
2age, Adult
 18
other values
 95

ages_in_group

100%
91-140
 100
105
 37
135-165
 26
150
 22
other values
 110

latitude_original

 32%
22.5537717
 95

longitude_original

 32%
114.0871167
 95

pig_strain

100%
HybDN
 100
LW
 19
BP
 17
BMc
 16
other values
 143

sex_in_group

66%
Females
 95
Females, males
 45
Females,castrated males
 28
Females, castrated males
 18
Males
 9

weight_kg_in_group

66%
52-102
 100
140-180
 26
140-190
 19
60
 17
other values
 33

Found an error? Search for existing discussions on GitHub – Open an issue on GitHub
Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi