Rocafort_2019_HIV

Study: Evolution of the gut microbiome following acute HIV-1 infection

Publication: Rocafort et al., Evolution of the gut microbiome following acute HIV-1 infection (2019, Microbiome)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJNA450025

Last annotation change: 2025-09-29

Human Metadata

CD4CD8_ratio

88%
0.2
 3
0.25
 2
0.37
 2
0.56000000000000005
 2
other values
39

CD4_count

88%
288
 2
520
 2
590
 2
945
 2
other values
40

HIV_test_result

53%
Negative
 18
Positive
 9
Indeterminate
 2

brady

100%
1316504.8
 1
1316513
 1
1316517.8
 1
1316519.2
 1
other values
50

note

64%
recent HIV infection
35

viral_load

66%
28789
 2
102989
 1
10458
 1
112123
 1
other values
31

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi