Riiser_2019_cod

Study: Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod

Publication: Riiser et al., Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod (2019, Environmental Microbiology)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB29346

Last annotation change: 2025-09-29

Animal Metadata

Maturity

84%
1
 21
2
 18
3
 6
0
 3

comment_health_status

 15%
Darkened abdominal area
 6
Red pigmentation
 3

length_cm

100%
52
 6
76
 6
36.5
 3
37
 3
other values
39

local_sampling_spot

57%
Brandholmboen
 12
Svinoya
 6
Nusfjord
 6
Ballstad
 6
Innersida
 3

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi