Podlesny_2020_FMT_RCDI

Study: Microbial Strain Engraftment, Persistence and Replacement after Fecal Microbiota Transplantation

Publication: Podlesny et al., Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation (2022, Microbiome)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB39023

Last annotation change: 2025-09-29

Human Metadata

FMT_Route

 48%
Colo
 13

description

100%
post-FMT
 11
pre-FMT
 8
donor
 8

donor

70%
Podlesny_2020_FMT_RCDI.subject_D19
 3
Podlesny_2020_FMT_RCDI.subject_D23
 3
Podlesny_2020_FMT_RCDI.subject_D29
 3
Podlesny_2020_FMT_RCDI.subject_D16
 2
other values
 8

donor_recipient

100%
recipient
19
donor
 8

donor_relationship

 48%
Husband
 7
Wife
 3
Daughter
 3

rCDI_Duration

 48%
12mo
 5
5mo
 3
4.5mo
 3
6mo
 2

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi