Lu_2018_HIV

Study: Association Between Gut Microbiota and CD4 Recovery in HIV-1 Infected Patients

Publication: Lu et al., Association Between Gut Microbiota and CD4 Recovery in HIV-1 Infected Patients (2018, Frontiers In Microbiology)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJNA391226

Last annotation change: 2025-09-29

Human Metadata

ART_duration_year_

100%
0
36
3.4
 5
2.8
 3
1.9
 2
other values
 25

CD16_CD56_NK_cell_counts_cells_mm3_

85%
92
 2
102
 1
104
 1
105
 1
other values
56

CD16_CD56_NK_cell_ratio_

85%
11.9
 3
10.5
 2
13.9
 2
15.8
 2
other values
52

CD19_B_cell_counts_cells_mm3_

85%
110
 4
125
 4
137
 2
174
 2
other values
49

CD19_B_cell_ratio_

85%
6.9
 3
10.9
 2
12.4
 2
16.6
 2
other values
52

CD3_T_cell_counts_cells_mm3_

85%
1014
 1
1017
 1
1020
 1
1026
 1
other values
57

CD3_T_cell_ratio_

85%
80.5
 3
68
 2
68.6
 2
69.2
 2
other values
52

CD4_CD28_T_cell_counts_cells_mm3_

85%
117
 1
120
 1
121
 1
134
 1
other values
57

CD4_CD28_T_cell_ratio_

85%
100
 3
92.5
 2
95.7
 2
97.7
 2
other values
52

CD4_T_cell_counts_before_ART_cells_mm3_

 46%
257
 2
7
 2
1
 1
116
 1
other values
 27

CD4_T_cell_counts_cells_mm3_

85%
437
 2
560
 2
120
 1
121
 1
other values
55

CD4_T_cell_ratio_

85%
19.5
 2
25
 2
25.4
 2
30.2
 2
other values
53

CD8_CD28_T_cell_counts_cells_mm3_

85%
221
 2
293
 2
134
 1
143
 1
other values
55

CD8_CD28_T_cell_ratio_

85%
37.7
 2
62
 2
64.2
 2
11.9
 1
other values
54

CD8_CD38_T_cell_counts_cells_mm3_

85%
1012
 1
1018
 1
1108
 1
1170
 1
other values
57

CD8_CD38_T_cell_ratio_

85%
79.6
 2
32.5
 1
33.6
 1
36.4
 1
other values
56

CD8_HLA_DR_T_cell_counts_cells_mm3_

85%
102
 2
81
 2
101
 1
1071
 1
other values
55

CD8_HLA_DR_T_cell_ratio_

85%
26.5
 2
82
 2
10.1
 1
12
 1
other values
55

CD8_T_cell_counts_cells_mm3_

85%
629
 2
848
 2
1031
 1
1065
 1
other values
55

CD8_T_cell_ratio_

85%
38.2
 2
47.1
 2
26.5
 1
27.3
 1
other values
55

Homing_Naive_CD4_T_cell_counts_cells_mm3_

85%
28
 3
18
 2
37
 2
70
 2
other values
52

Homing_Naive_CD4_T_cell_ratio_

85%
20.9
 3
31.2
 3
30
 2
30.7
 2
other values
51

Lymphocyte_counts_cells_mm3_

85%
1251
 2
1918
 2
1050
 1
1058
 1
other values
55

Lymphocyte_ratio_

85%
18.5
 2
25.9
 2
28.7
 2
38.4
 2
other values
53

Memory_CD4_T_cell_counts_cells_mm3_

85%
128
 2
189
 2
103
 1
117
 1
other values
55

Memory_CD4_T_cell_ratio_

85%
63.7
 2
77.1
 2
78.3
 2
100
 1
other values
54

Naive_CD4_T_cell_counts_cells_mm3_

85%
147
 2
178
 2
27
 2
338
 2
other values
53

Naive_CD4_T_cell_ratio_

85%
21.7
 2
22.9
 2
36.3
 2
0
 1
other values
54

Viral_load_copies_mL_

85%
TND
 35
104779
 1
106031
 1
10895632
 1
other values
 23

WBC_cells_mm3_

85%
3850
 2
4320
 2
4710
 2
7010
 2
other values
53

latitude_original

100%
39.92
71

longitude_original

100%
116.42
71

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi