Lesker_2019_mouse_iMGMC

Study: An Integrated Metagenome Catalog Reveals New Insights into the Murine Gut Microbiome

Publication: Lesker et al., An Integrated Metagenome Catalog Reveals New Insights into the Murine Gut Microbiome (2020, Cell Reports)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB32890

Last annotation change: 2025-08-11

Animal Metadata

latitude_original

100%
51.17
105

longitude_original

100%
10.45
105

microbiota

99%
Wildmice-E1-W0
 8
Chr-11
 7
Chr-9
 7
Harlan-2/Envigo
 7
other values
75

mouse_number

54%
1.0
 3
10.0
 3
12.0
 3
13.0
 3
other values
 45

sampling_location

99%
Feces
 30
Content
 21
Colon
 18
Cecum
 18
Ileum
 17

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi