Keller_2019_ancient_dental_calculus

Study: Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541-750)

Publication: Keller et al., Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541-750) (2019, Proceedings Of The National Academy Of Sciences Of The United States Of America)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB29991

Last annotation change: 2024-08-07

Human Metadata

age_code

100%
m
 9
ea
 6
a
 5
ii
 4
other values
 11

dating

71%
400-600
 6
500-550
 5
550-600
 5
500-600
 3
other values
 6

gender_code

100%
m
 13
f
 11
?
 11

group

100%
1-5
 6
18(A+B)
 3
131/132/133/134
 2
F 206-172
 2
other values
22

qpcr_y_pestis

100%
pos
34
pos*
 1

teeth

100%
M
 11
47
 7
36
 3
17
 2
other values
 12

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi