Huang_2018_chicken

Study: The chicken gut metagenome and the modulatory effects of plant-derived benzylisoquinoline alkaloids

Publication: Huang et al., The chicken gut metagenome and the modulatory effects of plant-derived benzylisoquinoline alkaloids (2018, Microbiome)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJNA417359

Last annotation change: 2025-08-11

Animal Metadata

age_days

100%
42
 125
56
 75
14
 50
28
 50
other values
 195

experimental_group

100%
NBJ
 40
NHC
 40
CBJ
 35
CHC
 35
other values
345

feed_additive/growth_promoter

83%
not collected
 135
50 mg/kg Sangrovit (Macleaya cordata extract 3.75% w/w premix)
 70
50 mg/kg Citifac (Chlortetracycline 20% w/w premix)
 70
150 mg/kg Sangrovit (Macleaya cordata extract 3.75% w/w premix)
 70
15 mg/kg Sangrovit (Macleaya cordata extract 3.75% w/w premix)
 70

geo_loc_name

100%
China:Hunan
 210
China:Beijing
 180
China:Guangdong
 30
China:Shandong
 30
other values
 45

isolation source

100%
jejunum
 99
ileum
 99
duodenum
 99
colorectum
 99
cecum
 99

sample_description

100%
pooled digesta from five chickens
 210
digesta from one chicken (biological replicate 3)
 95
digesta from one chicken (biological replicate 2)
 95
digesta from one chicken (biological replicate 1)
 94
digesta from one chicken (biologilca replicate 1)
 1

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi