Hernsdorf_2017_subsurface

Study: Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments.

Publication: Hernsdorf et al., Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments (2017, The ISME Journal)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJNA321556

Last annotation change: 2025-11-03

Environmental Metadata

ammonium_mM

100%
3.9 +- 0.3
 3
6.7 +- 0.5
 2
5.0 +- 0.4
 2
7.2 +- 0.3
 1
4.3 +- 0.3
 1

bicarbonate_mM

100%
36.1 +- 3.1
 3
49.2 +- 6.6
 2
45.9 +- 5.4
 2
45.9 +- 1.6
 1
34.4 +- 2.6
 1

calcium_mM

100%
0.67 +- 0.05
 3
1.47 +-0.14
 2
0.95 +- 0.04
 2
1.72 +- 0.11
 1
1.07 +- 0.10
 1

carbonate_mM

100%
0.10 +- 0.10
 3
0.12 +- 0.14
 2
0.09 +- 0.10
 2
0.09 +- 0.02
 1
0.06 +- 0.04
 1

chloride_mM

100%
39.5 +- 1.0
 3
84.6 +- 1.5
 2
50.8 +- 1.8
 2
93.1 +- 2.1
 1
59.2 +- 2.6
 1

magnesium_mM

100%
0.74 +- 0.02
 3
1.69 +- 0.12
 2
1.03 +- 0.04
 2
1.97 +- 0.09
 1
1.11 +- 0.07
 1

potassium_mM

100%
1.33 +- 0.08
 3
2.33 +- 0.11
 2
1.71 +- 0.06
 2
2.38 +- 0.05
 1
1.41 +- 0.19
 1

sodium_mM

100%
69.6 +- 3.6
 3
87.0 +- 4.0
 2
121 +- 2.3
 2
87.0 +- 2.3
 1
126 +- 1.7
 1

total_inorganic_carbon_mM

100%
39.2 +- 2.5
 3
54.2 +- 3.8
 2
49.2 +- 4.6
 2
50.0 +- 1.3
 1
36.7 +- 2.0
 1

total_organic_carbon_mM

100%
1.83 +- 1.17
 3
2.58 +- 0.25
 2
1.83 +- 0.17
 2
2.08 +- 0.13
 1
1.00 +- 0.06
 1

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi