Chng_2019_hospital

Study: Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment

Publication: Chng et al., Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment (2020, Nature Medicine)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB31632

Last annotation change: 2024-11-08

Environmental Metadata

hospital_floor

97%
7.0
194
9.0
 120
5.0
 14
11.0
 14
8.0
 13

latitude_original

100%
1.35
364

longitude_original

100%
103.82
364

sampling_site

97%
Bedside Locker
 90
Cardiac Table
 90
Bed Rails
 80
Aerator
 26
other values
 69

sampling_surface

97%
Metal
 137
Wood
 79
Metal and wood
 71
Plastic
 42
other values
 26

ward_type

97%
Standard
 144
MDRO
 143
Isolation room
 68

sample_title

100%
WEE025
 1
WEE026
 1
WEE027
 1
WEE028
 1
other values
360
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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi