Buschart_2016_T1D

Study: Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes.

Publication: Heintz-Buschart et al., Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes (2016, Nature Microbiology)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJNA289586

Last annotation change: 2024-08-20

Human Metadata

antibiotics

 29%
No
 53

blood_pressure_1

 26%
129
 4
135
 3
102
 2
105
 2
other values
 37

blood_pressure_2

 26%
73
 4
75
 4
66
 3
70
 3
other values
 34

cancer_treatment

 29%
No
 53

corticosteroids

 29%
NO
 48
YES
 5

cpe_c-peptide_ng/ml

 19%
1.7
 4
1.4
 3
1.6
 3
1.8
 3
other values
 23

diet_full

100%
omnivorous
181

ggt_gamma-glutamyltransferase_u/l

 28%
14.0
 7
13.0
 6
17.0
 6
10.0
 4
other values
 28

glu_glucose_mg/dl

 28%
81.0
 4
90.0
 3
182.0
 2
78.0
 2
other values
 40

got_glutamate-oxalacetate-transaminase_u/l

 28%
20.0
 6
25.0
 6
16.0
 5
23.0
 4
other values
 30

gpt_glutamate-pyruvate-transaminase_u/l

 28%
19.0
 6
14.0
 5
16.0
 5
17.0
 5
other values
 30

hba_glycated_haemoglobin_%

 28%
5.5
 7
5.8
 5
5.6
 4
5.4
 3
other values
 32

hdl_high-density_cholesterol_mg/dl

 28%
62.0
 4
74.0
 4
77.0
 4
75.0
 3
other values
 36

ins_insulin_mui/l

 23%
0.3
 2
1.0
 2
2.9
 2
3.2
 2
other values
 34

insulin_[u/day]

 29%
0
 26
48
 4
29
 3
39
 3
other values
 17

latitude_original

100%
49.5
181

ldl_low-density_cholesterol_mg/dl

 28%
118.0
 3
96.0
 3
108.0
 2
120.0
 2
other values
 41

lep_leptine_ng/ml

 26%
1.5
 2
6.0
 2
1.4
 1
1.6
 1
other values
 41

longitude_original

100%
6.2
181

metformin

 29%
No
 53

pro_pro-insulin_pmol/l

 24%
3.7
 5
4.3
 5
1.1
 2
1.7
 2
other values
 30

statins

 29%
NO
 41
YES
 9
visits 1-2: YES; visit 3: NO
 3

tch_cholesterol_mg/dl

 28%
145.0
 2
150.0
 2
161.0
 2
167.0
 2
other values
 43

thyroxin

 29%
NO
 43
YES
 10

tri_triglycerids_mg/dl

 28%
60.0
 3
41.0
 2
54.0
 2
55.0
 2
other values
 42

valproic_acid

 29%
NO
 50
YES
 3

vitamins

 29%
NO
 30
YES
 23

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi