Buck_2020_lake

Study: Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds

Publication: Buck et al., Comprehensive dataset of shotgun metagenomes from oxygen stratified freshwater lakes and ponds (2021, Scientific Data)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB38681

Last annotation change: 2025-09-29

Environmental Metadata

Chloride

 20%
9.3347749
 2
10.1049088404667
 1
10.5614487
 1
1586.01
 1
other values
 49

Fluoride

 18%
0.0778934523
 2
0.0835929732
 2
0.0968918553
 2
0.1120905777
 2
other values
 40

aluminimum_ug_l

 3%
104
 1
132
 1
18
 1
211
 1
other values
 5

ammonium_ug_l

79%
0
 12
0.332612672542824
 7
0.388048117966628
 5
0.498919008814236
 5
other values
182

calcium_ug_l

 19%
100.255117
 1
100.3593198
 1
100.576017579247
 1
100.9644976
 1
other values
 47

chlorophyll

 15%
52.14
 2
13.71
 1
14.67
 1
21.74
 1
other values
 35

conductivity_uS_cm

 29%
0.57
 3
0.0182
 2
0.1121
 2
303
 2
other values
 70

copper_ug_L

 3%
0.4
 1
0.6
 1
1
 1
1.1
 1
other values
 5

dissolved_organic_carbon_mg_l

 39%
1099.02004046392
 3
2039.84780237621
 3
0
 2
1032.41276528429
 2
other values
 96

exact_location

100%
Evo
 113
Neuchatel
 44
Kuujjuarapik-Whapmagoostui
 30
Jamtland
 23
other values
 57

ice_thickness

 1%
24
 3
27
 1
25
 1

lake_code

100%
MJ
 51
Loclat
 44
AM
 42
KT
 18
other values
 112

magnesium_ug_l

 19%
1.031
 1
1.214
 1
1.972
 1
12.546241
 1
other values
 47

manganese_ug_l

 3%
0
 1
162
 1
21
 1
39
 1
other values
 5

nitrate_nitrite_ug_l

 16%
47
 3
62
 2
65
 2
85
 2
other values
 36

nitrate_ug_l

61%
0
 28
0.580599275218571
 5
0.000290299637609
 4
0.001612775764496
 3
other values
 123

nitrite_ug_l

 46%
0
 83
0.2
 7
0.4
 3
0.016449765747007
 2
other values
 28

phosphate_ug_l

 44%
0.021058971437717
 17
0
 9
0.031588457156576
 8
0.042117942875434
 8
other values
 76

run

100%
R3
 95
R2
 87
R1
 85

samplimg_site

100%
Mekkojarvi
 51
Loclat
 44
Alinen Mustajarvi
 42
Lomtjarnan (703480-142137)
 21
other values
 109

silicon_ug_l

 3%
1371
 1
2524
 1
2677
 1
3171
 1
other values
 5

total_dissolved_nitrogen

 10%
510
 3
240
 2
310
 2
360
 2
other values
 19

total_nitrogen_mg_l

 31%
105.663718077777
 2
12.9509449049384
 2
130.758851121249
 2
147.786416500675
 2
other values
 76

total_organic_carbon_mg_l

 29%
1032.41276528429
 4
1040.73867468174
 3
1024.08685588683
 2
1107.34594986137
 2
other values
 68

total_phosphorus_mg_l

 32%
0.001775696474971
 3
1.64655491315521
 3
1.96940881769544
 3
2.00169420814947
 3
other values
 75

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi