Aw_2016_lettuce

Study: Metagenomic analysis of viruses associated with field-grown and retail lettuce identifies human and animal viruses.

Publication: Aw et al., Metagenomic analysis of viruses associated with field-grown and retail lettuce identifies human and animal viruses (2016, International Journal Of Food Microbiology)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJNA295085

Last annotation change: 2024-08-07

Environmental Metadata

host

100%
lettuce
60

latitude_original

100%
38.127
60

lettuce_type

100%
romaine
30
iceberg
30

longitude_original

100%
-94.3734
60

sample_location

100%
lettuce field
42
produce distribution center
 18

sample_mode

100%
harvest by field workers
44
harvest by research team
 16

sample_type

100%
stage3
 18
stage1
 18
control
 16
stage2
 8

sampling_proces

100%
harvest
34
in distribution center
 18
after packaging
 8

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi