Alneberg_2018_marine_baltic

Study: BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea.

Publication: Alneberg et al., BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea (2018, Scientific Data)

External link: SPIRE database (MAGs, genes and proteins including annotations)

Study accession: PRJEB22997

Last annotation change: 2025-09-29

Environmental Metadata

Comment_station_name

100%
TF0271
 10
Boknis Eck
 4
AT1
 3
AT3
 3
other values
24

Factor_Value_sample_group

100%
Transect
30
Redox
 14

Source_Name

100%
Leibniz Institute for Baltic Sea Research
30
cruise EMB087
 10
GEOMAR Helmholtz Centre for Ocean Research Kiel
 4

ammonium

72%
0.22
 4
0.28
 2
0.33
 2
0.34
 2
other values
22

bacterial_production

68%
103
 2
14
 2
10
 1
100
 1
other values
24

chlorophyll

68%
0.02
 2
0.07
 2
0.11
 2
2.63
 2
other values
22

dissolved_organic_carbon

68%
319
 2
104
 1
141
 1
142
 1
other values
25

dissolved_organic_nitrogen_micromolar

68%
15.8
 2
17.9
 2
10.6
 1
10.8
 1
other values
24

dissolved_oxygen

100%
0
 7
23.96521144
 2
276
 2
5.9394045
 2
other values
31

nitrate

68%
0
 10
0.05
 2
0.02
 1
0.07
 1
other values
 16

nitrite

72%
-0.01
 7
0.03
 4
0.02
 3
-0.02
 2
other values
 16

phosphate

72%
0.09
 3
0.02
 2
0.59
 2
0.01
 1
other values
24

salinity (PSU)

100%
10.9796
 2
11.282
 2
11.7535
 2
12.1052
 2
other values
36

sample_material_processing

100%
Size fraction (micrometer): >0.2
32
Size fraction (micrometer): >3
 6
Size fraction (micrometer): 0.2-3
 6

silicate

72%
0.45
 2
0.36
 1
0.46
 1
0.7
 1
other values
27

sulfide

 4%
26.95
 1
0
 1

turbidity_ntu

72%
0.05003
 2
0.11125
 2
0.29609
 2
0.468
 2
other values
24

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Sample alias Spire sample name Longitude Latitude Geographic location Location resolution Collection date Collection date end Last change Tax id Environment material Environment biome Environmental package Environment feature Artificial Pmid Doi